Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923193.1_cds_XP_016471874.1_64165
CDS Infomation

[gene=LOC107793939] [db_xref=GeneID:107793939] [protein=ankyrin-3-like isoform X2] [protein_id=XP_016471874.1] [location=join(17974..18162,18643..18780,19094..20623)] [gbkey=CDS]
Sequence

ATGTTAATCAAAGCTGGGGCATCTCAGCAGGCTTGTGAGGAAGCTCTGTTGGAGGCCAGC
TGTCATGGGCATGCAAGATTTGTCGAGATGCTCATGGAATCAGAAATGATTCGACCTCGG
ATTGCTGTACATGCTTTCTTCACTGGATGCTGCCGTGGATTTGGAGATGTTGTGGACACT
CTCCTTAAGTGTGGAGTGAATGTCGATACTACAAATCGTGTGTTGCTCCAGTCATGCAAA
CCTTCTCTGCATACAAATGTTGACTGCTCGGCGCTTGTGGCTGCTGTTGTTAGTAGGCAA
GTCTCTGTAGTCCGTCTACTCCTTGAGGCTGGCGCAAAAACTGATGGCCCAGTCCATCTT
GGAGCTTGGTCCTGGGATGCAGCTTCAGGTGAAGAATTTCGAGTAGGTGCTGGATTAGCA
GATCCCTATGCCATTACTTGGTGTGCTGTGGAGTACTTTGAAGCTAGTGGCTCTATTCTG
CAAATGCTCCTCCAGCGGCTCGCCCCCAGTACACTCTGTGGAAGATCTCTTCTCCACCAT
GCTATTCTTTGTGGTAATGCAGGAGCAGTTTCAGTGCTTCTGAAATGTGGTGCTCATGTA
GAATCTCCAGTTAAAACCTCTCGGAATGTTGAGTTCCGCCCTATACATATGGCAGCACGA
CTTGGGTTCTCAAGCGTTATTAAATGTTTGATTGACTTCGGCTGTGATATAGACTCAAGA
ACGGACACAGGAGATACAGCTTTAATGATCTCTGCGAGATTCAAGAGGGAAGACTGCCTC
AAAGTATTGACTATAGCTGGTGCTGATTTTGGTTTGGTTAATGCAGCTGGTGAATCAGCA
AGCTCCATTGCTGCATCCAGTCGATGGAAGCTTGGTTTTCAAGGTGCAGTTCTGGAAGTC
ATTCAGAGTGAAAAGATTCCCAAGTCAAGCAACATGTCTGTCTTTTTGCCATTACTGTTT
GTGGCTCAATCCAGGGACCTTTTATCCTTAAAGGCTCTGATTGCACGAGGAGATATTGAT
CTGGATAGCCAAGATGACCAAGGTTTCTCCGCTGTAATGATCACCGCTGCAGAGGGTCAT
GTAGACGGCTTCAGATTGCTTGTGCATGGCGGGGCTAATGTCAAGCTGCAGAACAAATCT
GGGGAGACTGCTGTTACCCTCTGTGCACTAAATCAAAATCGTGATCGGTTTGAAAAGGTT
CTGCTCGAATTTGCTCTTGAACAGGGTAGTCGAAACGCTGCAGGTTTCTATGCACTGCAT
TGTGCAGCTCGATGTGGCGACTTGGATGCAGTTAAACAGTTAACAACCAGGGGTTATGAT
GTAAACATGTCCAATGGGGACGATTACACACCACTCATGCTTGCAGCAAGGGAAGGGCAT
GGCCGCACATGTGAATTCTTAATCTCTTGTGGGGCACGATGCGATATCAAGAACGCATTG
GGTGAAACTGCACTTTCCCTTGCTAGGAAGACACAGAAAAATGAGGCAGAGAGGGTGATA
CTGGATGAACTTGCTAGGAAACTGGTCTTAACCGGTGCCCAAGTGAAGAAGCACATAAAG
GGAGGTAAAGGGTCTCCACATATGAAAGTTCTTAAAATGGTTGAAGCTGCTGGAATATTG
CGTTGGGGAAAATCAAGTGGGCGTAATGTTGTATGCCGGGAGGCAGAAGTGGGGCCGAGT
TTGAAGTTTCAGAAGATCAGGCAAAGAAAAGGTGATGCTGAGCTACCTGGAATATTTAGG
GTGATCACGACCAAGAACAAGGAAGTGCACTTTGTGTGTGAGGGTGATTACGAGACAGCA
GAGCTTTGGGTGAGGGGAATAAAGCTTGTGACAAGAGAAGCTATTTTTAGCAAGTAG

Peptide Sequence

PEP ID

XP_016471874.1
PEP Infomation

PREDICTED: ankyrin-3-like isoform X2 [Nicotiana tabacum]
Sequence

MLIKAGASQQACEEALLEASCHGHARFVEMLMESEMIRPRIAVHAFFTGCCRGFGDVVDT
LLKCGVNVDTTNRVLLQSCKPSLHTNVDCSALVAAVVSRQVSVVRLLLEAGAKTDGPVHL
GAWSWDAASGEEFRVGAGLADPYAITWCAVEYFEASGSILQMLLQRLAPSTLCGRSLLHH
AILCGNAGAVSVLLKCGAHVESPVKTSRNVEFRPIHMAARLGFSSVIKCLIDFGCDIDSR
TDTGDTALMISARFKREDCLKVLTIAGADFGLVNAAGESASSIAASSRWKLGFQGAVLEV
IQSEKIPKSSNMSVFLPLLFVAQSRDLLSLKALIARGDIDLDSQDDQGFSAVMITAAEGH
VDGFRLLVHGGANVKLQNKSGETAVTLCALNQNRDRFEKVLLEFALEQGSRNAAGFYALH
CAARCGDLDAVKQLTTRGYDVNMSNGDDYTPLMLAAREGHGRTCEFLISCGARCDIKNAL
GETALSLARKTQKNEAERVILDELARKLVLTGAQVKKHIKGGKGSPHMKVLKMVEAAGIL
RWGKSSGRNVVCREAEVGPSLKFQKIRQRKGDAELPGIFRVITTKNKEVHFVCEGDYETA
ELWVRGIKLVTREAIFSK

Transcript Sequence

Gene sequence data has not been registered.